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lymph node

An explanation for the low quality antibodies produced during serious SARS-CoV-2 infection

22 October 2020 by Vincent Racaniello

coronavirus

Although we are less than a year into the SARS-CoV-2 pandemic, it appears that the antibodies induced by infection are often of poor quality, and B cell memory seems limited. An explanation for this outcome might be a consequence of the loss of germinal centers in COVID-19 patients.

Examination of lymph nodes and spleen of patients who succumbed to COVID-19 revealed a striking absence of germinal centers. During a virus infection, foreign antigens brought into the secondary lymphoid organs are recognized by B cells, which then proliferate and differentiate. This activity takes place within germinal centers, which also provides an environment for the production of high affinity antibodies by the process of somatic hypermutation. The production of long-lived memory B cells also depends on the germinal center.

The absence of germinal centers in patients with severe COVID-19 may explain why these patients produce poor quality antibody that is not durable. However, these patients do produce antiviral antibodies, often at higher levels than in patients with mild disease. These antibodies are not produced in germinal centers, which explains why they do not provide optimal or durable immunity.

It seems likely that the cytokine storm produced during severe COVID-19 is at least partly responsible for the loss of germinal centers. Loss of germinal centers during cytokine storm in mice has been shown to be reversed by blockade of TNF-alpha. This cytokine is abundant in lymph nodes from SARS-CoV-2 infected patients, and was recently identified as a biomarker that may predict serious disease. Monoclonal antibodies to TNF-alpha are licensed for the treatment of other diseases such as rheumatoid arthritis, and could be assessed for the ability to improve outcomes in COVID-19.

An important question is why only some SARS-CoV-2 infected patients progress to serious COVID-19. Such patients might have defects in lymphocyte function yet to be determined. Furthermore, they might be unable to mount an effective early innate response to infection, and consequently virus reproduces to high levels, causing an over-exuberant immune response. This scenario is no doubt simplistic and will surely be modified by the results of further studies of immune responses in infected patients. Whether patients with less severe disease are able to produce germinal centers is unknown but should be determined.

Other viral infections, including those caused by influenza H5N1 virus, Ebolaviruses, SARS- and MERS-CoV are also characterized by cytokine storm and depletion of lymphoid cells. It is possible that similar underlying immune mechanisms govern the serious disease caused by these infections.

What are the implications of these findings for vaccines to prevent COVID-19? It is unlikely that vaccination with any of the candidates currently in development will lead to germinal center loss because most of these vaccines do not comprise infectious SARS-CoV-2. Consequently the vaccine antigens – mainly spike glycoprotein – need only induce durable protective immunity. A tall order, but one that can be achieved as long as germinal centers remain intact.

Filed Under: Basic virology Tagged With: B cell, coronavirus, COVID-19, germinal center, lymph node, memory B cells, pandemic, SARS-CoV-2, somatic hypermutation, spleen, viral, virology, virus

Immune 2: Lymphocytes after dark

25 November 2017 by Vincent Racaniello

Cindy, Steph, and Vincent reveal that lymphocyte trafficking through lymph nodes and lymph is circadian – it is dependent on the time of day.

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Filed Under: Immune Tagged With: 24 hour clock, adaptive immunity, B cell, circadian, clock gene, immune, immunology, lymph, lymph node, lymphocyte, T cell

Lymphocytes after dark

16 November 2017 by Vincent Racaniello

B cell

When you are infected with a microbe, pieces of the pathogen are picked up by sentinel dendritic cells and brought to local lymph nodes. There the sentinels present their gifts to lymphocytes – B (pictured; image credit) and T cells – who then decide if they are foreign, in which case an immune response begins. These lymphocytes circulate throughout the body not continuously, but in a circadian manner – a 24 hour cycle.

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Filed Under: Basic virology, Information Tagged With: circadian clock, dendritic cell, immunology, lymph node, lymphocyte, macrophage, sentinel cell, viral, virology, virus, viruses

TWiV 161: Concerto in B

11 December 2011 by Vincent Racaniello

antibodyHosts: Vincent Racaniello, Rich Condit, Alan Dove, and Gabriel Victora

Vincent, Rich, Alan and Gabriel review the production of antibodies by B cells, and how high affinity antibodies are selected in the germinal centers of lymph nodes.

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Links for this episode:

  • An antibody molecule (png)
  • Antibodies (virology blog)
  • Germinal center dynamics revealed by two photon microscopy (Cell)
  • Two photon microscopy (Wikipedia)
  • Gabriel Victora on piano (YouTube)
  • Propose an ASM General Meeting session
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  • Letters read on TWiV 161

Weekly Science Picks

Gabriel – Antibody-based protection against HIV (Nature)
Rich – Contact
Alan – Flu shot dystonia (YouTube)
Vincent – Sciflies and RocketHub

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Neva – Virus and retrovirus
Ayesha – The Life Scientific (BBC)

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Filed Under: This Week in Virology Tagged With: antibody, B cell, germinal center, immunology, lymph node, somatic mutation, two photon microscopy, VDJ rearrangement, viral, virology, virus

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by Vincent Racaniello

Earth’s virology Professor
Questions? virology@virology.ws

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