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hepatitis C virus

TWiV 141: Mickey gets HCV

10 July 2011 by Vincent Racaniello

hcv miceHosts: Vincent Racaniello, Rich Condit, Dickson Despommier, Alan Dove, and Matt Evans

Matt Evans joins Vincent, Rich, Dickson, and Alan to deconstruct a mouse model for hepatitis C virus infection.

[powerpress url=”http://traffic.libsyn.com/twiv/TWiV141.mp3″]

Click the arrow above to play, or right-click to download TWiV #141 (117 MB .mp3, 97 minutes).

Subscribe to TWiV (free) in iTunes , at the Zune Marketplace, by the RSS feed, by email, or listen on your mobile device with the Microbeworld app.

Links for this episode:

  • Mouse model for HCV infection (Nature)
  • Commentary on HCV mouse model (Nature)
  • Matt Evans on the Wall Street Journal Report
  • TWiV on Facebook
  • Letters read on TWiV 141

Weekly Science Picks

Matt – Benezra letter to NIH (pdf); (NIH response and Nature commentary)
Dickson –
The Big Thirst by Charles Fishman
Alan –
Earth’s First Steps by Jerry MacDonald
Rich – Final space shuttle launch and NIAID paylines
Vincent – Hertog Global Strategy Initiative

Send your virology questions and comments (email or mp3 file) to twiv@microbe.tv, or call them in to 908-312-0760. You can also post articles that you would like us to discuss at microbeworld.org and tag them with twiv.

Filed Under: This Week in Virology Tagged With: HCV, hepacivirus, hepatitis C virus, murine model, viral, virology, virus, virus entry, virus receptor

TWiV 137: Look what the dog dragged in

12 June 2011 by Vincent Racaniello

dog_humanHosts: Vincent Racaniello, Alan Dove, Rich Condit, Dickson Despommier, Amit Kapoor, and Ian Lipkin

The TWiV team speaks with Amit Kapoor and Ian Lipkin about how they discovered canine hepacivirus, and its implications for the origin and evolution of hepatitis C virus.

[powerpress url=”http://traffic.libsyn.com/twiv/TWiV137.mp3″]

Click the arrow above to play, or right-click to download TWiV #137 (69 MB .mp3, 96 minutes).

Subscribe to TWiV (free) in iTunes , at the Zune Marketplace, by the RSS feed, by email, or listen on your mobile device with the Microbeworld app.

Links for this episode:

  • Characterization of canine hepacivirus (PNAS)
  • Humanized mouse model for HCV (EurekAlert!)
  • Summary of CHV study from Mailman School of Public Health
  • Center for Infection and Immunity at Columbia University
  • TWiV on Facebook
  • Letters read on TWiV 137

Weekly Science Picks

Alan – What do marine mammals eat? (YouTube)
Rich
– NIH rocket boys
Dickson – Cytomegalovirus needs an antiviral protein (Science)
Vincent – All pdfs free at National Academy of Science Press

Listener Pick of the Week

Adriana and Ye Jung  – The man who was cured of AIDS (article one and two)

Send your virology questions and comments (email or mp3 file) to twiv@microbe.tv, or call them in to 908-312-0760. You can also post articles that you would like us to discuss at microbeworld.org and tag them with twiv.

Filed Under: This Week in Virology Tagged With: amit kapoor, canine hepacivirus, chv, flavivirus, HCV, hepacivirus, hepatitis C virus, ian lipkin, viral, virology, virus

Canine hepacivirus, a relative of hepatitis C virus

25 May 2011 by Vincent Racaniello

yellow labradorContemporary human viruses most likely originated by cross-species transmission from non-human animals. Examples include HIV-1, which crossed from chimpanzees to humans, and SARS coronavirus, which originated in bats. Since the 1989 discovery of hepatitis C virus (classified as a hepacivirus in the family Flaviviridae) the origin of the virus been obscure. During the characterization of respiratory infections of domestic dogs, a virus was discovered that is the most genetically similar animal virus homolog of HCV.

HCV is a substantial human pathogen: 200 million people worldwide are chronically infected and are at risk for the development of hepatocellular carcinoma. The source of HCV is unknown because there are no closely related animal virus homologs, but the hunt for related viruses has focused mainly on nonhuman primates. The identification of a related virus was fortuitous, and came about during a study of respiratory viruses that infect dogs. Nasal swabs were obtained from dogs with respiratory illness in shelters in Texas, Utah, and Pennsylvania. Sequence analysis of viral nucleic acids revealed the presence of a virus related to HCV, which was named canine hepacivirus (CHV). The virus was found in respiratory samples from 6 of 9 and 3 of 5 dogs in two separate outbreaks of respiratory disease, but not in 60 healthy pet dogs.

CHV was present in liver, but not lung, of 5 dogs that had died from unexplained gastrointestinal illness. The amount of CHV RNA in respiratory samples was substantially higher than in liver. Viral RNA was detected in the cytoplasm of hepatocytes in canine liver, but whether CHV is hepatotropic (replicates in liver cells) in dogs is not known. In humans, the amount of HCV in respiratory samples is typically very low. CHV may therefore infect different cells and tissues in dogs than does HCV in humans.

Bioinformatic analysis of CHV revealed that it is the genetically more related to HCV than any other known virus. HCV and CHV probably shared a common ancestor that circulated between 500 and 1,000 years ago – many years after dogs were domesticated. It is possible that hepaciviruses are mainly dog viruses, and that HCV arose by transmission of the virus from a dog to a human. An alternative scenario that cannot be excluded is that hepaciviruses infect many animal species. Screening of other animals for the presence of hepaciviruses must be done to determine which hypothesis is correct.

It was not possible to infect canine cultured cells with CHV, using clinical specimens from dogs.  The reason for this failure is not known, but could mean that the cells used are not susceptible and/or permissive for viral replication. Furthermore, a full-length DNA copy of the viral genome, which could be used to produce infectious viral RNA, was not reported. Propagation of the virus in cell cultures will be essential for enabling research on CHV replication and pathogenesis.

The discovery of CHV is exciting because the virus provides clues about the origins of HCV and will likely stimulate a search for related viruses in other animals. It is possible that CHV infection of dogs might be a model for understanding the pathogenesis of HCV, which currently is only possible in chimpanzees. A convenient animal model would be valuable for devising new ways to prevent and treat HCV infections.

A. Kapoor, P. Simmonds, G. Gerold, N. Qaisar, K. Jain, J.A. Henriquez, C. Firth, D.L. Hirschberg, C. Rice, S. Shields, & W.I. Lipkin. (2011). Characterization of a canine homolog of hepatitis C virus Proc. Natl. Acad. Sci. USA

Filed Under: Basic virology, Information Tagged With: canine hepacivirus, chv, HCV, hepatitis C virus, viral, virology, virus, zoonosis

TWiV 130: Rhino tracking, wrestling pox, and HCV in the crosshairs

24 April 2011 by Vincent Racaniello

organ culture hrv cHosts: Vincent Racaniello, Alan Dove, and Rich Condit

Vincent, Alan, and Rich discuss growth in culture of newly identified rhinovirus C, vaccinia transmission among wrestlers and martial artists, and results of phase III clinical trial of boceprevir, a new inhibitor of hepatitis C virus replication.

[powerpress url=”http://traffic.libsyn.com/twiv/TWiV130.mp3″]

Click the arrow above to play, or right-click to download TWiV #130 (45 MB .mp3, 93 minutes).

Subscribe to TWiV (free) in iTunes , at the Zune Marketplace, by the RSS feed, by email, or listen on your mobile device with the Microbeworld app.

Links for this episode:

  • Growth of newly identified rhinovirus C (Nature Medicine)
  • Global distribution of rhinovirus C (EID)
  • Vaccinia transmission among wrestlers (EID)
  • Vaccine transmission in a martial arts gym (EID)
  • Boceprevir for untreated HCV infection (NEJM)
  • Boceprevir for previously treated HCV infection (NEJM)
  • HCV antiviral pipeline
  • The good viruses (Nat Rev Micro)
  • TWiV on Facebook
  • Letters read on TWiV 130

Weekly Science Picks

Rich – Rock-paper-scissors vs computer (thanks, Megan!)
Alan –
WebCite
Vincent – Edward Jenner Museum (EID)

Listener Pick of the Week

Derek Tolly  – A Paralyzing Fear: The Story of Polio in America (IMDb)

Send your virology questions and comments (email or mp3 file) to twiv@microbe.tv, or call them in to 908-312-0760. You can also post articles that you would like us to discuss at microbeworld.org and tag them with twiv.

Filed Under: This Week in Virology Tagged With: antiviral, boceprevir, HCV, hepatitis C virus, infectious DNA, organ culture, rhinovirus c, smallpox, vaccinia, viral, virology, virus

TWiV 121: Huskies go viral

20 February 2011 by Vincent Racaniello

viral huskiesHosts: Vincent Racaniello, Michael Katze, Michael Gale, Deborah Fuller, and Shawn Iadonato

Episode #121 of the podcast This Week in Virology is a conversation about careers in virology, systems biology, innate immunity, and antiviral research recorded at the University of Washington in Seattle.

[powerpress url=”http://traffic.libsyn.com/twiv/TWiV121.mp3″]

Click the arrow above to play, or right-click to download TWiV #121 (65 MB .mp3, 90 minutes).

Subscribe to TWiV (free) in iTunes , at the Zune Marketplace, by the RSS feed, or by email, or listen on your mobile device with the Microbeworld app.

Links for this episode:

  • A systems biology approach to infectious disease research (mBio)
  • Infectious Curiosity (thanks, Gopal!)
  • Astronomy Cast (thanks, Jacob!)
  • The Journal of Negative Results (thanks, Patricia!)
  • Scientist Solutions (thanks, Patricia!)
  • Bacteriophage as antibacterial solution (thanks, Peter!)
  • TWiV on Facebook
  • Letters read on TWiV 121
  • Video of this episode –  view below or download .mp4 (1 GB)


Weekly Science Picks

Michael K – Pasteur Museum
Deborah – Undaunted Courage by Stephen Ambros
Michael G – The Eighth Day of Creation by Horace Freeland Judson
Vincent –
The Emperor of All Maladies by Siddhartha Mukherjee

Send your virology questions and comments (email or mp3 file) to twiv@microbe.tv or leave voicemail at Skype: twivpodcast. You can also post articles that you would like us to discuss at microbeworld.org and tag them with twiv.

Filed Under: This Week in Virology Tagged With: antiviral, hepatitis C virus, influenza, innate immunity, interferon, systems biology, viral, virology, virus

TWiV 97: California virology

5 September 2010 by Vincent Racaniello

Hosts: Vincent Racaniello, Peter Sarnow, and Bert Semler

On episode #97 of the podcast This Week in Virology, Vincent visited Peter Sarnow and Bert Semler during a trip to California, and spoke with them about their work on internal ribosome entry, and the requirement for a cellular microRNA for hepatitis C virus replication.

[powerpress url=”http://traffic.libsyn.com/twiv/TWiV097.mp3″]

Click the arrow above to play, or right-click to download TWiV #97 (66 MB .mp3, 91 minutes)

Subscribe to TWiV (free) in iTunes , at the Zune Marketplace, by the RSS feed, or by email, or listen on your mobile device with Stitcher Radio.

Links for this episode:

  • Eukaryotic mRNAs that might contain an IRES (PNAS)
  • Modulation of HCV RNA abundance by a liver-specific microRNA (Science)
  • Viral small RNAs (PLoS Pathogens)
  • Bridging IRES elements to the translation apparatus (Biochim Biophys Acta)
  • A nucleo-cytoplasmic SR protein functions in viral IRES mediated translation (EMBO J)
  • Nuclear vs cytoplasmic routes to IRES mediated translation (Trends in Microbiology)
  • Letter read on TWiV 97

Send your virology questions and comments (email or mp3 file) to twiv@microbe.tv or leave voicemail at Skype: twivpodcast. You can also post articles that you would like us to discuss at microbeworld.org and tag them with twiv.

Filed Under: This Week in Virology Tagged With: HCV, hepatitis C virus, internal ribosome binding, IRES, microrna, mIR-122, picornavirus, poliovirus, translation, viral, virology, virus

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by Vincent Racaniello

Earth’s virology Professor
Questions? virology@virology.ws

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