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dsRNA

Viral Defenses In Plantae

1 November 2018 by Gertrud U. Rey

TMV-tobacco
Tobacco mosaic virus-infected tobacco leaf. Image credit: Principles of Virology, 4th Edition, ASM Press.

By Gertrud U. Rey

Post-transcriptional gene silencing (PTGS) is an RNA regulation pathway in eukaryotes that depends on the presence of double stranded RNA (dsRNA) in the cytoplasm of cells. As stated by Nels Elde in TWiEVO 8, dsRNA in the cytoplasm has an effect synonymous to “blood in the water” for the innate immune system, triggering a cascade of events that leads to the degradation of complementary mRNAs. In plants, this pathway has been thought to serve as the predominant mechanism of antiviral defense.

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Filed Under: Basic virology, Gertrud Rey, Information Tagged With: decapping enzyme, dsRNA, in plantae, P bodies, plant virus, post-transcriptional gene silencing, siRNA, viral, virology, virus, viruses, Xrn1

A cell RNA that regulates innate immunity

18 October 2018 by Vincent Racaniello

RIG-I activationAll immune responses, from intrinsic to adaptive, need to be regulated – if left on indefinitely they will damage the host. The innate immune response is no exception, and a cellular RNA has been identified that binds to a sensor of viral RNA and regulates the production of interferon (IFN).

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Filed Under: Basic virology, Information Tagged With: dsRNA, IFN, innate immunity, interferon, lncRNA, long non-coding RNA, RIG-I, viral, virology, virus, viruses

TWiV 514: Staying below the ADAR

7 October 2018 by Vincent Racaniello

The TWiVumvirate reviews this years crop of Nobel Prizes, and how cells prevent leakage of mitochondrial double-stranded RNA into the cytoplasm, which would otherwise lead to the production of interferon.

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Filed Under: This Week in Virology Tagged With: ADAR1, Alu, checkpoint blockade, CTLA-4, degradosome, directed evolution, dsRNA, helicase, IFN, innate immunity, MDA5, mitochiondria, mutagenesis, Nobel Prize, PD-1, phage display, RNA sensor, type 1 interferonopathy, viral, virology, virus, viruses

Mitochondrial double-stranded RNA is dangerous

4 October 2018 by Vincent Racaniello

mitochondrionMitochondria are descended from bacteria that invaded cells 1.5 billion years ago and never left. The mitochondrial genome is like that of bacteria: circular double-stranded DNA, only smaller. And just like the genome of bacteria, RNA can be made from both strands of mitochondrial DNA – which results in the formation of dsRNA. Fortunately there are systems in place to make sure that this dsRNA does not cause excessive interferon (IFN) production, which would damage the cell.

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Filed Under: Basic virology, Information Tagged With: dsRNA, innate immunity, interferon, interferonopathy, MDA5, mitochondria, viral, virology, virus, viruses

TWiV 469: Mycovirus stuffed potatoes

26 November 2017 by Vincent Racaniello

The TWiV hosts discuss a plant virus that infects a fungus, and whether you need to work insane hours to succeed in science.

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Filed Under: This Week in Virology Tagged With: cross-Kingdom, cucumber mosaic virus, dsRNA, fungus, mycovirus, phytopathogenic, plant virus, potato, success in science, transmission, viral, virology, virus, viruses

TWiV 465: Theodora the explorer

29 October 2017 by Vincent Racaniello

Theodora Hatziioannou joins the TWiV team to discuss a macaque model for AIDS, and how a cell protein that blocks HIV-1 infection interacts with double-stranded RNA.

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Filed Under: This Week in Virology Tagged With: AIDS, animal model, APOBEC3H, CRNA, deamination, dsRNA, HIV-1, pigtail macaque, restriction factor, viral, virology, virus, viruses, X-ray structure

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by Vincent Racaniello

Earth’s virology Professor
Questions? virology@virology.ws

With David Tuller and
Gertrud U. Rey

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