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About viruses and viral disease

calicivirus

A portal for RNA exit

14 February 2019 by Vincent Racaniello

Calicivirus-portal
Top view of calicivirus portal. VP1 is green, VP2 is red.

Virus particles are metastable: they must be highly stable, to protect the nucleic acid while traveling from host to host or cell to cell, and then come apart to liberate the genome into the cell. New insight into this uncoating process comes from beautiful images of feline calicivirus showing formation of a portal on the capsid upon receptor engagement.

[Read more…] about A portal for RNA exit

Filed Under: Basic virology, Information Tagged With: calicivirus, cell receptor, conformational changes, fJAM-A, hydrophobic peptide, portal, viral, virology, virus, viruses, VP1, VP2

TWiV 534: Portal to the METTL

10 February 2019 by Vincent Racaniello

The TWiV crew reveal a unique portal on the calcivirus capsid formed upon receptor engagement, and the regulation of interferon responses in virus-infected cells by methylation of mRNA.

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Show notes at microbe.tv/twiv

Filed Under: This Week in Virology Tagged With: calicivirus, cryoEM, cytomegalovirus, endocytosis, HCMV, herpesvirus, IFN, ISG, m6A methylation, methyl eraser, methyl reader, methyl writer, METTL, mRNA stability, portal, receptor, uncoating, viral, virology, virus, viruses

TWiV 312: She sells B cells

23 November 2014 by Vincent Racaniello

On episode #312 of the science show This Week in Virology, the TWiVbolans discuss the finding that human noroviruses, major causes of gastroenteritis, can for the first time be propagated in B cell cultures, with the help of enteric bacteria.

You can find TWiV #312 at www.microbe.tv/twiv.

Filed Under: This Week in Virology Tagged With: B cell, calicivirus, cell culture, diarrhea, Ebola, ebolavirus, gastroenteritis, hemorrhagic fever, norovirus, plaque assay, semen, sexual transmission, transmission, two bucket disease, viral, virology, virus, vomiting

TWiV 134: Meet Ralph, your cruise director

22 May 2011 by Vincent Racaniello

norovirusHosts: Vincent Racaniello, Rich Condit, Dickson Despommier, Alan Dove, and Stephanie Karst

Vincent, Rich, Alan, and Dickson review noroviruses with Stephanie Karst, PhD.

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Click the arrow above to play, or right-click to download TWiV #134 (68 MB .mp3, 94 minutes).

Subscribe to TWiV (free) in iTunes , at the Zune Marketplace, by the RSS feed, by email, or listen on your mobile device with the Microbeworld app.

Links for this episode:

  • Caliciviruses at ViralZone
  • Norovirus page at CDC
  • Norovirus infection does not confer protection (J Virology)
  • Norovirus vaccine by LigoCyte (pdf)
  • The official diarrhea song
  • TWiV on Facebook
  • Letters read on TWiV 133

Weekly Science Picks

Stephanie – Effectors of the type I interferon response (Nature)
Dickson – Receptor for Ebola virus (PNAS)
Rich
– A History of Vaccines
Alan – The Worst Journey in the World by Apsley Cherry-Garrard
Vincent – ASM Live 2011 webcast

Listener Pick of the Week

Sophie  – TED talk app for iPad and iPhone

Send your virology questions and comments (email or mp3 file) to twiv@microbe.tv, or call them in to 908-312-0760. You can also post articles that you would like us to discuss at microbeworld.org and tag them with twiv.

Filed Under: This Week in Virology Tagged With: calicivirus, gastroenteritis, norovirus, stephanie karst, vaccine, viral, virology, virus

TWiV 109: Virologia en México

28 November 2010 by Vincent Racaniello

Hosts: Vincent Racaniello, Rosa Maria del Angel, and Ana Lorena Gutiérrez

On episode #109 of the podcast This Week in Virology, Vincent visits Mexico City and speaks with Rosa Maria del Angel and Ana Lorena Gutiérrez about virology in Mexico, and their work on dengue and caliciviruses.

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Click the arrow above to play, or right-click to download TWiV #109 (58 MB .mp3, 80 minutes).

Subscribe to TWiV (free) in iTunes , at the Zune Marketplace, by the RSS feed, or by email, or listen on your mobile device with Stitcher Radio.

Links for this episode:

  • Rosa’s PNAS paper on proteins that bind poliovirus RNA
  • Lorena’s papers on influence of proteins that bind poliovirus RNA on tropism and attenuation
  • CINVESTAV
  • TWiV on Facebook

Weekly Science Picks

Lorena – Caliciviruses by Hansman, Jiang, and Green
Vincent –
Insights into dengue virus genome replication by Alcaraz-Estrada, Yocupicio, and del Angel

Send your virology questions and comments (email or mp3 file) to twiv@microbe.tv or leave voicemail at Skype: twivpodcast. You can also post articles that you would like us to discuss at microbeworld.org and tag them with twiv.

Filed Under: This Week in Virology Tagged With: calicivirus, Dengue, Mexico, mexico city, podcast, TWiV, viral, virology, virus

A plant virus that switched to vertebrates

26 April 2010 by Vincent Racaniello

Circovirus genomeViruses can be transmitted to completely new host species that they have not previously infected. Usually host defenses stop the infection before any replication and adaptation can take place. On rare occasions, a novel population of viruses arises in the new host. These interspecies infections can sometimes be deduced by sequence analyses, providing a glimpse of the amazing and unpredictable paths of virus evolution. One example is a plant virus that switched hosts and infected vertebrates.

Circoviruses infect vertebrates and have small, circular, single-stranded DNA genomes. Nanoviruses have the same genome structure, but infect plants. The genes encoding one of the viral proteins – called the Rep protein – appear to be hybrids, and share significant sequence similarity. They also exhibit homology with a protein encoded by caliciviruses, which are RNA viruses that infect many different vertebrates.

Analysis of the viral DNA sequences suggests that two remarkable events occurred during the evolution of circoviruses and nanoviruses. Not long ago, a nanovirus was transmitted from a plant to a vertebrate. This event might have occurred when a vertebrate fed on an infected plant. The virus adapted to vertebrates, and the circovirus family was established. After the host switch from plants to vertebrates, recombination took place between the circovirus and a vertebrate calicivirus. A reverse transcriptase probably converted the circovirus RNA genome to DNA to allow recombination to occur.

Similar interspecies transmission events have lead to outbreaks of human disease. One notable example is the transfer of simian immunodeficiency virus-1 from chimpanzees to humans. This host switch event, which is believe to have occurred in the early part of the 20th century, lead to the current AIDS pandemic.

Gibbs, M. (1999). Evidence that a plant virus switched hosts to infect a vertebrate and then recombined with a vertebrate-infecting virus Proceedings of the National Academy of Sciences, 96 (14), 8022-8027 DOI: 10.1073/pnas.96.14.8022

Filed Under: Basic virology, Information Tagged With: calicivirus, circovirus, evolution, host switch, nanovirus, recombination, viral, virology, virus

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by Vincent Racaniello

Earth’s virology Professor
Questions? virology@virology.ws

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