• Skip to main content
  • Skip to primary sidebar
virology blog

virology blog

About viruses and viral disease

bat

TWiV 885: Russian bats and Ankara vectors

7 April 2022 by Vincent Racaniello

TWiV reveals an ACE2-dependent sarbecovirus from Russian bats that is not inhibited by anti-SARS-CoV-2 antibodies, and a modified vaccinia virus Ankara vectored vaccine that protects nonhuman primates from Delta infection.

Hosts: Vincent Racaniello, Rich Condit, and Brianne Barker

Click arrow to play
Download TWiV 885 (73 MB .mp3, 122 min)
Subscribe (free): Apple Podcasts, Google Podcasts, RSS, email

Become a patron of TWiV!

Show notes at microbe.tv/twiv

Filed Under: This Week in Virology Tagged With: ACE2, bat, coronavirus, COVID-19, pandemic, SARS-CoV-2, vaccine, vaccinia virus vector, viral, virology, virus, viruses

SARS-like bat coronaviruses are not only in China

18 February 2021 by Vincent Racaniello

It is well past the time to stop blaming a laboratory in China for the release of SARS-CoV-2. Such fallacies reflect an ignorance of scientific facts, including the recent finding of closely related coronaviruses in bats in Thailand.

The bat CoV RatG13, sampled in 2013 in Yunnan province, shares 96% whole genome identity with SARS-CoV-2, suggesting a likely bat origin of the pandemic virus. To identify other possible sources for highly related viruses, a colony of 300 bats in eastern Thailand, consisting only of one species, Rhinolophus acuminatus, was sampled in June 2020. Thirteen of 100 bat rectal swab samples were positive for a single PCR amplicon with 95.86% sequence identity to SARS-CoV-2 and 96.21% identity to bat CoV-RaTG13. This virus, named RacCS203, appears to be the dominant coronavirus circulating in this bat colony. Phylogenetic analyses indicate that RacCS203 is a new member of the SARS-CoV-2 related CoV lineage (SC2r-CoV).

[Read more…] about SARS-like bat coronaviruses are not only in China

Filed Under: Basic virology, Information Tagged With: bat, coronavirus, COVID-19, pandemic, Rhinolophus, SARS-CoV-2, viral, virology, virus, viruses

Pandemics and anthropogenic environmental change

20 August 2020 by Vincent Racaniello

All human viruses have their origin in a virus that crossed from a different animal species. The encounters that lead to these spillovers are driven by explosive human population growth and incredible change occurring in all ecosystems brought about by human occupation of almost every corner of the planet. The extent to which land-use change contributes to zoonotic diseases has always been suspected and was recently established by a global study of the effect of such changes on local zoonotic host communities.

One of my favorite stories about how land use changes drive zoonotic emergence is about Argentine hemorrhagic fever. Between the two world wars, the Argentine pampa was converted to fields for the massive growth of maize by eliminating weeds by the use of herbicides. The maize grew, but in its shadow a new shade-tolerant weed flourished. This weed led to the emergence of a new dominant mouse, Calomys musculinus (pictured; image credit). A novel human hemorrhagic fever was first described in this area in 1953, and the causative agent, Junin virus, was isolated from the new mouse.

To examine the global importance of such land use changes in the exposure of humans to new zoonotic diseases, a global database of 6,801 ecological assemblages was examined. The database compiles >3.2 million species records from 666 published studies in which biodiversity across land use was sampled. Records of 376 host species in 6,801 survey sites were identified across 6 continents.

The analysis revealed that known wildlife hosts of pathogens shared with humans make up a greater proportion of local species richness (18–72% higher) and total abundance (21–144% higher) in sites under extensive human use (secondary, agricultural and urban ecosystems) compared with nearby undisturbed habitats. The magnitude of this effect varies according to the species, but it is the strongest for rodent, bat and passerine bird zoonotic host species. These taxa are important as zoonotic reservoirs. In addition, mammals that harbor more pathogens are more likely to be present in human-managed ecosystems.

These findings indicate that that anthropogenic global land use changes are establishing interfaces between people, livestock and wildlife reservoirs of zoonotic disease that will increase the chances of future outbreaks and pandemics.

Some readers might be asking, how did land use change lead to emergence of SARS-CoV-2? We know that the virus emerged from a bat reservoir in rural China, where farming has intensified in recent decades. Such activities place farmers in contact with wildlife, allowing regular spillover of viruses. Eventually these events will hit the jackpot – a randomly emerged virus that just so happens to be able to efficiently infect humans.

A potential solution to this problem? There are many reasons for anthropogenic land use modification by humans, but a major one is for farming. Move this activity indoors, to Vertical Farms.

Filed Under: Basic virology, Information Tagged With: anthropogenic, bat, COVID-19, ecology, pandemic, SARS-CoV-2, spillover, viral, virology, virus, viruses, zoonotic disease

TWiV 623: Bats and coronaviruses with Peter Daszak

4 June 2020 by Vincent Racaniello

Peter Daszak joins TWiV to explain the work of EcoHealth Alliance in surveillance of bats in China for SARS-related coronaviruses to provide the information needed to prevent future pandemics, and why NIH recently withdrew financial support for their work.

Click arrow to play
Download TWiV 623 (41 MB .mp3, 68 min)
Subscribe (free): iTunes, Google Podcasts, RSS, email

Become a patron of TWiV!

Show notes at microbe.tv/twiv

Filed Under: This Week in Virology Tagged With: bat, COVID-19, EcoHealth Alliance, pandemic, SARS-CoV-2, SARS-releated coronavirus, viral, virology, virus, viruses, wildlife surveillance

TWiEVO 56: Revising the drafts of coronavirus evolution

21 May 2020 by Vincent Racaniello

Nels and Vincent continue their discussion of SARS-CoV-2 evolution, including understanding recurrent mutations in the viral genome, and the potential for re-emergence of the virus from an animal reservoir.

Click arrow to play
Download TWiEVO 56 (53 MB .mp3, 88 min)
Subscribe (free): iTunes, Google Podcasts, RSS, email

Become a patron of TWiEVO

Show notes at microbe.tv/twievo

Filed Under: This Week in Evolution Tagged With: animal reservoir, bat, coronavirus, COVID-19, evolution, genome mutations, homoplasy, SARS-CoV-2, viral, virology, virus, viruses

TWiV 615: Peter Daszak of EcoHealth Alliance

19 May 2020 by Vincent Racaniello

Vincent speaks with Peter Daszak, President of EcoHealth Alliance, a global nonprofit organization dedicated to protecting wildlife and public health from the emergence of disease.

Click arrow to play
Download TWiV 615 (22 MB .mp3, 36 min)
Subscribe (free): iTunes, Google Podcasts, RSS, email

Become a patron of TWiV!

Show notes at microbe.tv/twiv

Filed Under: This Week in Virology Tagged With: bat, EcoHealth Alliance, Nipah virus, pandemic, SARS virus, spillover, viral, virology, virus, viruses, wildlife sampling

  • Go to page 1
  • Go to page 2
  • Go to page 3
  • Interim pages omitted …
  • Go to page 7
  • Go to Next Page »

Primary Sidebar

by Vincent Racaniello

Earth’s virology Professor
Questions? virology@virology.ws

With David Tuller and
Gertrud U. Rey

Follow

Facebook, Twitter, YouTube, Instagram
Get updates by RSS or Email

Contents

Table of Contents
ME/CFS
Inside a BSL-4
The Wall of Polio
Microbe Art
Interviews With Virologists

Earth’s Virology Course

Virology Live
Columbia U
Virologia en Español
Virology 101
Influenza 101

Podcasts

This Week in Virology
This Week in Microbiology
This Week in Parasitism
This Week in Evolution
Immune
This Week in Neuroscience
All at MicrobeTV

Useful Resources

Lecturio Online Courses
HealthMap
Polio eradication
Promed-Mail
Small Things Considered
ViralZone
Virus Particle Explorer
The Living River
Parasites Without Borders

Creative Commons License
This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License.