Detecting viruses: the plaque assay

6 July 2009

One of the most important procedures in virology is measuring the virus titer – the concentration of viruses in a sample. A widely used approach for determining the quantity of infectious virus is the plaque assay. This technique was first developed to calculate the titers of bacteriophage stocks. Renato Dulbecco modified this procedure in 1952 for use in animal virology, and it has since been used for reliable determination of the titers of many different viruses.

polio-plaquesTo perform a plaque assay, 10-fold dilutions of a virus stock are prepared, and 0.1 ml aliquots are inoculated onto susceptible cell monolayers. After an incubation period, to allow virus to attach to cells, the monolayers are covered with a nutrient medium containing a substance, usually agar, that causes the formation of a gel. When the plates are incubated, the original infected cells release viral progeny. The spread of the new viruses is restricted to neighboring cells by the gel. Consequently, each infectious particle produces a circular zone of infected cells called a plaque. Eventually the plaque becomes large enough to be visible to the naked eye. Dyes that stain living cells are often used to enhance the contrast between the living cells and the plaques. Only viruses that cause visible damage of cells can be assayed in this way. An example of plaques formed by poliovirus on a monolayer of HeLa cells is shown at left. In this image, the cells have been stained with crystal violet, and the plaques are readily visible where the cells have been destroyed by viral infection.

The titer of a virus stock can be calculated in plaque-forming units (PFU) per milliliter. To determine the virus titer, the plaques are counted. To minimize error, only plates containing between 10 and 100 plaques are counted, depending on the size of the cell culture plate that is used. Statistical principles dictate that when 100 plaques are counted, the sample titer will vary by plus or minus 10%. Each dilution is plated in duplicate to enhance accuracy. In the example shown below, there are 17 plaques on the plate made from the 10-6 dilution. The titer of the virus stock is therefore 1.7 x 108 PFU/ml.

plaque-assay

Next we’ll consider how the plaque assay can be used to prepare clonal virus stocks, a step that is essential for studying viral genetics.

Dulbecco, R., & Vogt, M. (1953). Some problems of animal virology as studied by the plaque technique. Cold Spring Harbor Symp. Quant. Biol., 18, 273-279

  • OLUROPO2OLAJIDE

    The number of plate form represent the number of virus  OLAJIDE OLUROPO

  • Xenobio

    If you can find some chikungunya-specific antiserum or monoclonal antibodies you could do an immunostaining procedure to detect foci of virus infection, instead of simply staining with crystal violet to see live vs. dead cells. 

    You can also try using an overlay of carboxymethylcellulose or Avicel (it’s a brand name for a mixture of cmc + insoluble cellulose) because they form suspensions that are viscous enough to stop the virus from moving around, but still liquid and can be aspirated. As opposed to solid agarose overlays which can be a bit tricky to peel off without messing up your cells. 

  • Happychronicles

    Actually isn’t the value 1.7x10e-9?

  • Saeed ahmed

    i have one question if you can help me i shall be very thankfull to you for this act my question is
    the
    bacterial OD value is 0.4 which is equivalent to 1*10^8 cfu/ml and the
    bacteriophage valuse is 1*10^9 and i want the MOI valuse 0.1 then how i
    can calculate it i am waiting for your reply.

  • Abdul kapur

    hi sir please explain the quantification,chaion virusracterization,and purificat

  • Sonal lad

    hi sir,i am bsc microbiology student. and my problem is that ,now in msc we have done the practical of isolating the phagefor about 10 times but still we failed and still could not isolate the phage .so i want standard procedure and guidance.thank u for this post.

  • Aaron Olea

    w0w its so amazing !!!

  • Guest

    Hi Sir,
    Nice. Can you please also upload protocol for calculating viral titers after isolating from mouse organs (like Spleen or Lung)? I want to know about how to isolate viruses from organs and what solutions can I use for that? Thanks

  • Rajendharpadma

    hello sir,
    I am testing chickungya virus titre by plaque assay method could you please tell me that how to minimize the variation between replicates and shall i consider 100 plaques for calculation or shall i consider in between 10-100 please help me in this aspect

  • http://www.virology.ws profvrr

    You should count between 10-100 plaques (that is for a 10 cm plate). 

  • Hjilrefavj

    شكرا علي الكلام العلمي الجميل ده جزاكم الله خير

  • Bosy

    بس ياجماعه حد ممكن يجاوبني علي سؤال ده اذا سمحتوا  احنا عارفين ان الفيروس مش بيعيش الا داخل خلايا العائل طيب ازاي بيعيش علي ميديا عاديه  احنا اخدنا التجارب ف المعمل بس الفيروس مش بيعيش علي ميديا لكن بيعيش ف  عائل ياريت حد يجاوبني

  • Cadaver Hibrido

    Rodrigo
    To determinate the presence of virus, you should determinate the E2 and E6 genes. So, you can determinate if HPV is in integrated form or episomal status.
    The load viral is determinated by the quantification of E6 copy number

  • vinay

    how to calculate virus copy number?

  • Diarra

    Hi, i’m a master student,
    My problem is that, at the end of my plaque i have some damage on the cells. Not all the bottom of the plate is intact, almost 10-30% of the bottom of my plate are damaged.
    Please what are the possible causes of that?
    Thank you