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	<title>Comments on: Adaptive immune defenses</title>
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	<link>http://www.virology.ws/2009/07/03/adaptive-immune-defenses/</link>
	<description>About viruses and viral disease</description>
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		<title>By: The complement system</title>
		<link>http://www.virology.ws/2009/07/03/adaptive-immune-defenses/comment-page-1/#comment-17652</link>
		<dc:creator>The complement system</dc:creator>
		<pubDate>Mon, 28 Sep 2009 21:18:19 +0000</pubDate>
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		<description>[...] and cell surface proteins that is a major primary defense and a clearance component of innate and adaptive immune responses. At least 30 different complement proteins act sequentially to produce a wide [...]</description>
		<content:encoded><![CDATA[<p>[...] and cell surface proteins that is a major primary defense and a clearance component of innate and adaptive immune responses. At least 30 different complement proteins act sequentially to produce a wide [...]</p>
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		<title>By: Adaptive immune defenses: Antibodies</title>
		<link>http://www.virology.ws/2009/07/03/adaptive-immune-defenses/comment-page-1/#comment-11201</link>
		<dc:creator>Adaptive immune defenses: Antibodies</dc:creator>
		<pubDate>Wed, 22 Jul 2009 20:16:13 +0000</pubDate>
		<guid isPermaLink="false">http://www.virology.ws/?p=1745#comment-11201</guid>
		<description>[...] important to understand how vaccines work. To do this we must have a good understanding of adaptive immune defenses. Today we&#8217;ll begin a discussion of the humoral arm of the adaptive immune response &#8211; [...]</description>
		<content:encoded><![CDATA[<p>[...] important to understand how vaccines work. To do this we must have a good understanding of adaptive immune defenses. Today we&#8217;ll begin a discussion of the humoral arm of the adaptive immune response &#8211; [...]</p>
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		<title>By: profvrr</title>
		<link>http://www.virology.ws/2009/07/03/adaptive-immune-defenses/comment-page-1/#comment-10426</link>
		<dc:creator>profvrr</dc:creator>
		<pubDate>Mon, 20 Jul 2009 17:48:21 +0000</pubDate>
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		<description>What is &#039;remembered&#039; is conserved protein sequences that bind&lt;br&gt;antibodies (in the case of B cell memory, for example). Every particle&lt;br&gt;is not antigenically different - the genome is different but that does&lt;br&gt;not always translate into different protein. When differences emerge&lt;br&gt;in antigenic sites, that&#039;s when antigenic drift occurs, and antibodies&lt;br&gt;no longer neutralize the virus. More on this to come.</description>
		<content:encoded><![CDATA[<p>What is &#39;remembered&#39; is conserved protein sequences that bind<br />antibodies (in the case of B cell memory, for example). Every particle<br />is not antigenically different &#8211; the genome is different but that does<br />not always translate into different protein. When differences emerge<br />in antigenic sites, that&#39;s when antigenic drift occurs, and antibodies<br />no longer neutralize the virus. More on this to come.</p>
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		<title>By: mdubuque</title>
		<link>http://www.virology.ws/2009/07/03/adaptive-immune-defenses/comment-page-1/#comment-5973</link>
		<dc:creator>mdubuque</dc:creator>
		<pubDate>Mon, 06 Jul 2009 23:48:13 +0000</pubDate>
		<guid isPermaLink="false">http://www.virology.ws/?p=1745#comment-5973</guid>
		<description>What exactly is &quot;remembered&quot; here?  Since every viral particle is different, it would seem that the adaptive system needs to remember &quot;similarities&quot; and not just individual signatures.&lt;br&gt;&lt;br&gt;In other words, they seem to have somehow classified viruses by serial homology, in my view.&lt;br&gt;&lt;br&gt;Are there disadvantages to having too broad of spectrum of &quot;memory&quot; in different aspects of the adaptive system?  How is that memory &quot;tuned&quot; and &quot;modulated&quot;?&lt;br&gt;&lt;br&gt;I remain intriuged by the notion that all this coding and &quot;memory&quot; in viral systems can be informed by the debate on mathematical linguistics.&lt;br&gt;&lt;br&gt;Matt Dubuque</description>
		<content:encoded><![CDATA[<p>What exactly is &#8220;remembered&#8221; here?  Since every viral particle is different, it would seem that the adaptive system needs to remember &#8220;similarities&#8221; and not just individual signatures.</p>
<p>In other words, they seem to have somehow classified viruses by serial homology, in my view.</p>
<p>Are there disadvantages to having too broad of spectrum of &#8220;memory&#8221; in different aspects of the adaptive system?  How is that memory &#8220;tuned&#8221; and &#8220;modulated&#8221;?</p>
<p>I remain intriuged by the notion that all this coding and &#8220;memory&#8221; in viral systems can be informed by the debate on mathematical linguistics.</p>
<p>Matt Dubuque</p>
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