TWiV 69: They’re all safecrackers

by Vincent Racaniello on 7 February 2010

Hosts: Vincent Racaniello, Alan Dove, and Rich Condit

Vincent, Alan, and Rich review recent outbreaks of mumps in the UK, US, and Israel, protection of mice against 2009 H1N1 influenza A virus by 1918-like and classical swine H1N1 vaccines, and a virus-like particle vaccine for chikungunya virus.

This episode is sponsored by Data Robotics Inc. Use the promotion code VINCENT to receive $50 off a Drobo or $100 off a Drobo S.

Win a free Drobo S! Contest rules here.

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Download TWiV #69 (59 MB .mp3, 82 minutes)

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Links for this episode:

Weekly Science Picks

Rich John Moran Florida Nature Photography
Alan Periodic Table of Videos
Vincent The Protein Databank Educational Resources

Send your virology questions and comments (email or mp3 file) to twiv@twiv.tv or leave voicemail at Skype: twivpodcast. You can also post articles that you would like us to discuss at microbeworld.org and tag them with twiv.

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Virology lecture #5: Attachment and entry

by Vincent Racaniello on 5 February 2010


Download: .wmv (386 MB) | .mp4 (131 MB)

There are some errors in this lecture – I’ll correct them during the next session.

Visit the virology W3310 home page for a complete list of course resources.

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Now playing: Viral plaque formation

by Vincent Racaniello on 3 February 2010

viral_plaquesOne of the most important procedures in virology is measuring the virus titer – the concentration of viruses in a sample. A widely used approach for determining the quantity of infectious virus is the plaque assay. In this technique, the spread of progeny viruses released by individually infected cells is restricted to neighboring cells by a semisolid medium. Consequently, each infectious particle produces a circular zone of infected cells called a plaque. By imagining live, virus-infected cells using a microscope, beautiful movies have been made which show how a plaque develops in real time.

To produce the movies, cells were infected with vaccinia virus, covered with a semi-solid medium, and placed in an incubator. The monolayers were examined periodically until a small plaque became visible. The infected cells were then placed on an inverted microscope fitted with a camera. Images of the plaque were taken every hour for 12-19 hours and assembled into a movie.

The first movie shows plaque formation on monkey cells infected with vaccinia virus. The virus infection begins at a small focus in the center, then spreads radially outwards. As the infection spreads, the cells undergo changes know as cytopathic effect. The large circle of dead cells would appear as a plaque if the monolayer were stained.

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The second movie, made at higher magnification, shows spread at the edge of a viral plaque. The vaccinia virus used for this experiment carries the gene encoding enhanced green fluorescent protein (EGFP). Hence the infected cells fluoresce green as viral replication proceeds.

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By showing very clearly how a viral plaque develops, these movies will be an invaluable teaching resource for years to come. I am grateful to the authors of this study for providing an up-close view of a technique that animal virologists have been using since 1952.

Doceul, V., Hollinshead, M., van der Linden, L., & Smith, G. (2010). Repulsion of Superinfecting Virions: A Mechanism for Rapid Virus Spread Science DOI: 10.1126/science.1183173

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Virology lecture #4: Structure of viruses

by Vincent Racaniello on 2 February 2010


Download: .wmv (394 MB) | .mp4 (110 MB)

Visit the virology W3310 home page for a complete list of course resources.

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TWiV 68: Ode to a plaque

by Vincent Racaniello on 1 February 2010

Hosts: Vincent Racaniello, Alan Dove, and Rich Condit

Vincent, Alan, and Rich are enthralled by movies of vaccinia virus plaque formation, then consider how repulsion of superinfection virions leads to rapid virus spread, and a therapeutic prostate cancer vaccine.

This episode is sponsored by Data Robotics Inc. Use the promotion code VINCENT to receive $50 off a Drobo or $100 off a Drobo S.

Win a free Drobo S! Contest rules here.

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Download TWiV #68 (58 MB .mp3, 80 minutes)

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Links for this episode:

Weekly Science Picks

Rich Foundations of Virology – PowerPoint by Frederick A. Murphy (bio/interview pdf)
Alan Spoonful of Medicine – Nature Medicine blog
Vincent The Feynman Lectures (thanks Ilya!)

Send your virology questions and comments (email or mp3 file) to twiv@twiv.tv or leave voicemail at Skype: twivpodcast. You can also post articles that you would like us to discuss at microbeworld.org and tag them with twiv.

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TWiP 4: Trichinella life cycle

by Vincent Racaniello on 31 January 2010

twip_200Hosts: Vincent Racaniello and Dickson Despommier

On episode 4 of the podcast “This Week in Parasitism”, Vincent and Dick trace the life cycle of Trichinella spiralis in an infected host.

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TWiP is brought to you by the American Society for Microbiology at Microbeworld.org.

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  • Trichinella life cycle (jpg)
  • Newborn larva entering muscle cell (jpg)
  • Adult T. spiralis in columnar epithelial cell (jpg)
  • Adult female T. spiralis (jpg)
  • Infective first stage T. spiralis larva in Nurse cell in muscle tissue (jpg)
  • Adult female T. spiralis with fully formed larvae in uterus (jpg)
  • Adult male T. spiralis with claspers on tail (jpg)
  • Clinical correlations in trichinosis (jpg)
  • Letters read on TWiP #4

Download TWiP #4 (59 MB .mp3, 82 minutes)

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Virology lecture #3: Genomes and genetics

by Vincent Racaniello on 29 January 2010


Download: .wmv (333 MB) | .mp4 (75 MB)

Visit the virology W3310 home page for a complete list of course resources.

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XMRV infection is enhanced by prostatic protein fragments

by Vincent Racaniello on 27 January 2010

amyloid_temFragments of an abundant protein produced by the prostate form amyloid fibrils that enhance infection of cells by human immunodeficiency virus type 1. These fibrils, called semen-derived enhancer of virus infection (SEVI), have been found to boost infection of prostate cells by the retrovirus XMRV. Is this evidence that XMRV causes prostate cancer?

Because most HIV-1 infections are a consequence of genital exposure to semen of virus-infected men, seminal fluid was screened for peptides or proteins that enhance viral infectivity. Peptides (34 – 40 amino acids in length) derived from prostatic acidic phosphates, a common protein found in semen, were found to dramatically enhance HIV-1 infection of cultured cells. These peptide fragments form amyloid fibrils which bind both virions and cells, thereby promoting virus attachment and stimulating infectivity. The prostatic amyloid fibrils, called SEVI, are found at high levels in semen, which also stimulates HIV infection. SEVI is believed to play an important role in sexual transmission of HIV. Inhibitors of the stimulatory effect of SEVI on HIV infection, such as surfen, may have therapeutic value.

Xenotropic murine leukemia virus-related virus (XMRV) has been detected in prostate cancer tissues and is therefore a candidate tumor virus. XMRV, which has also been implicated in chronic fatigue syndrome, was first isolated from prostate tissue. Therefore it made perfect sense to determine whether SEVI, which originates from the prostate gland, enhances XMRV infection.

The observation that SEVI enhances XMRV infection is consistent with the possibility that the virus is sexually transmitted. Men with a history of prostatitis or sexually transmitted infections appear to have a higher risk of acquiring prostate cancer. However, the effect of a prostate-derived peptide on XMRV infection might be coincidental: the amyloid fibrils could stimulate infection by other viruses, as noted by the virologists who discovered SEVI:

…the capability to promote the interaction between virions and the cell surface is independent of the viral Env glycoprotein and hence not restricted to retroviruses. Thus, further studies on the role of amyloids in the transmission and pathogenesis of enveloped viruses are highly warranted.

About 30 human diseases, including Alzheimer’s, are associated with deposits of amyloid. Bacterial and fungal infections can also lead to formation of amyloid fibrils – which could explain why sexually transmitted diseases increase the likelihood of acquiring prostate cancer. The ability of these fibrils to enhance infection with different viruses should be examined. It’s possible that different amyloid fibrils are a new general risk factor for certain viral infections.

Hong, S., Klein, E., Das Gupta, J., Hanke, K., Weight, C., Nguyen, C., Gaughan, C., Kim, K., Bannert, N., Kirchhoff, F., Munch, J., & Silverman, R. (2009). Fibrils of Prostatic Acid Phosphatase Fragments Boost Infections with XMRV (Xenotropic Murine Leukemia Virus-Related Virus), a Human Retrovirus Associated with Prostate Cancer Journal of Virology, 83 (14), 6995-7003 DOI: 10.1128/JVI.00268-09

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Virology lecture #2: The infectious cycle

by Vincent Racaniello on 26 January 2010


Download: .wmv (348 MB) | .mp4 (116 MB)

Visit the virology W3310 home page for a complete list of course resources.

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TWiV 67: Wasting deer and the Hulk rabbit

by Vincent Racaniello on 24 January 2010

Hosts: Vincent Racaniello, Alan Dove, and Marc Pelletier

Vincent, Alan, and Marc talk about chronic wasting disease of deer caused by prions, blocking the semen-derived enhancer of HIV infection with surfen, and making green transgenic rabbits using a lentiviral vector.

This episode is sponsored by Data Robotics Inc. Use the promotion code VINCENT to receive $50 off a Drobo or $100 off a Drobo S.

Audio clip: Adobe Flash Player (version 9 or above) is required to play this audio clip. Download the latest version here. You also need to have JavaScript enabled in your browser.

Download TWiV #67 (64 MB .mp3, 88 minutes)

Subscribe to TWiV (free) in iTunes , at the Zune Marketplace, by the RSS feed, or by email.

Links for this episode:

Weekly Science Picks
Marc Association of Science-Technology Centers Passport Program
Alan Zooniverse
Vincent Grand Rounds at the Mailman School of Public Health

Send your virology questions and comments (email or mp3 file) to twiv@twiv.tv or leave voicemail at Skype: twivpodcast. You can also post articles that you would like us to discuss at microbeworld.org and tag them with twiv.

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